EBV-GCR - The EBV Gastric Cancer Resource
EBV-GCR - Correlation of Cellular mRNA Expression and EBV Status
Description: The purpose of this analysis is to compare expression of candidate cellular mRNAs between Epstein-Barr virus (EBV) positive, microsatellite-unstable/instability (MSI), chromosomal instability (CIN), genomically stable (GS), mutant polymerase epsilon (POLE), and Normal control tissue from the TCGA gastric carcinoma (GC) cohort. Select the candidate mRNA by typing the name in the input box on the top right. Generated figures can be resized via dragging the right or bottom figure edges, or via the grey triangle in the bottom right edge of the figure. Box plots can be downloaded as PNG or PDF files and the information necessary to reproduce the box plots can be downloaded as a CSV file. Level 3 mRNA expression data from the TCGA GC cohort was downloaded from the Broad Genome Data Analysis Center’s Firehose server Link .
Download the Differentially Expressed Gene (DEG) Analysis: Click Here
Video Guide: Click Here
Citing EBV-GCR: Salnikov MY, Wang E, Christensen E, Prusinkiewicz MA, Shooshtari P, Mymryk JS. The EBV Gastric Cancer Resource (EBV-GCR): A Suite of Tools for Investigating EBV-Associated Human Gastric Carcinogenesis. Viruses. 2023 Mar 27;15(4):853.
